Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.9□□□□□ -0.66
Raet1cO08604 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1cO08604 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.9□□□□□ -0.66
Raet1cO08604 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1cO08604 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1cO08604 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1cO08604 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1cO08604 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.9□□□□□ -0.66
Raet1cO08604 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1cO08604 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.9□□□□□ -0.66
Raet1cO08604 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1cO08604 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.89□□□□□ -0.67
Raet1cO08604 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm24830-201ENSMUST00000102024 166 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Gm24934-201ENSMUST00000103764 111 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Gm15370-201ENSMUST00000117158 253 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Gm11531-201ENSMUST00000117614 555 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Raet1cO08604 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Raet1cO08604 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm6013-201ENSMUST00000212264 699 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Gm5950-201ENSMUST00000213337 772 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Raet1cO08604 Gm26232-201ENSMUST00000083360 166 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.89□□□□□ -0.67
Raet1cO08604 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
Raet1cO08604 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1cO08604 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1cO08604 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.88□□□□□ -0.67
Raet1cO08604 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.88□□□□□ -0.67
Raet1cO08604 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Raet1cO08604 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.88□□□□□ -0.67
Raet1cO08604 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Raet1cO08604 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Raet1cO08604 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Raet1cO08604 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Raet1cO08604 Gm13297-201ENSMUST00000120205 934 ntBASIC10.88□□□□□ -0.67
Raet1cO08604 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.88□□□□□ -0.67
Raet1cO08604 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.88□□□□□ -0.67
Raet1cO08604 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Raet1cO08604 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Raet1cO08604 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Raet1cO08604 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.88□□□□□ -0.67
Raet1cO08604 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.88□□□□□ -0.67
Raet1cO08604 Gm18935-201ENSMUST00000212692 664 ntBASIC10.88□□□□□ -0.67
Raet1cO08604 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.88□□□□□ -0.67
Raet1cO08604 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.88□□□□□ -0.67
Raet1cO08604 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Raet1cO08604 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Raet1cO08604 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms