Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
B020004C17RikJ3QP07 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
B020004C17RikJ3QP07 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
B020004C17RikJ3QP07 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
B020004C17RikJ3QP07 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm23218-201ENSMUST00000158124 276 ntBASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm6450-201ENSMUST00000200896 574 ntBASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
B020004C17RikJ3QP07 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gm11783-201ENSMUST00000119549 885 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gm7150-201ENSMUST00000122032 981 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gm25951-201ENSMUST00000175330 64 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gm9136-201ENSMUST00000193368 454 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gm17931-201ENSMUST00000208132 634 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Gm5451-201ENSMUST00000080545 579 ntBASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
B020004C17RikJ3QP07 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Gm8531-201ENSMUST00000188319 893 ntBASIC13.55□□□□□ -0.24
B020004C17RikJ3QP07 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms