Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3139J3QK78 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3139J3QK78 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3139J3QK78 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3139J3QK78 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Gm3139J3QK78 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.15□□□□□ -0.46
Gm3139J3QK78 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3139J3QK78 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm3139J3QK78 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm3139J3QK78 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.15□□□□□ -0.46
Gm3139J3QK78 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3139J3QK78 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.15□□□□□ -0.47
Gm3139J3QK78 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3139J3QK78 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3139J3QK78 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm3139J3QK78 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.14□□□□□ -0.47
Gm3139J3QK78 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Gm7857-201ENSMUST00000117957 358 ntBASIC12.14□□□□□ -0.47
Gm3139J3QK78 Gm15711-201ENSMUST00000118889 535 ntBASIC12.14□□□□□ -0.47
Gm3139J3QK78 Gm12266-201ENSMUST00000120311 962 ntBASIC12.14□□□□□ -0.47
Gm3139J3QK78 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Gm18038-201ENSMUST00000197900 485 ntBASIC12.14□□□□□ -0.47
Gm3139J3QK78 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.14□□□□□ -0.47
Gm3139J3QK78 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm3139J3QK78 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm4909-201ENSMUST00000118749 794 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm12380-201ENSMUST00000119012 544 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm12164-201ENSMUST00000121695 551 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm17040-202ENSMUST00000170597 889 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Mir7677-201ENSMUST00000184226 67 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm28450-201ENSMUST00000187349 638 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Rps4l-202ENSMUST00000204242 789 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gm3139J3QK78 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.13□□□□□ -0.47
Gm3139J3QK78 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3139J3QK78 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.12□□□□□ -0.47
Gm3139J3QK78 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.12□□□□□ -0.47
Gm3139J3QK78 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gm3139J3QK78 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms