Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh1F7BJK1 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm22331-201ENSMUST00000158066 136 ntBASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm19087-201ENSMUST00000191430 946 ntBASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gm29705-201ENSMUST00000212598 474 ntBASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Pcdh1F7BJK1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Gm8652-201ENSMUST00000181363 964 ntBASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Pcdh1F7BJK1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh1F7BJK1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms