Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clca3bE9PUL3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Gm270-201ENSMUST00000223010 976 ntBASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clca3bE9PUL3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Gm17040-202ENSMUST00000170597 889 ntBASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Gm27530-201ENSMUST00000184096 98 ntBASIC13.09□□□□□ -0.31
Clca3bE9PUL3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Gm17931-201ENSMUST00000208132 634 ntBASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.09□□□□□ -0.31
Clca3bE9PUL3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clca3bE9PUL3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clca3bE9PUL3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clca3bE9PUL3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Clca3bE9PUL3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Gm11509-201ENSMUST00000117358 325 ntBASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 AU022133-201ENSMUST00000200601 873 ntBASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Gm42599-201ENSMUST00000201308 469 ntBASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Rps4l-202ENSMUST00000204242 789 ntBASIC13.08□□□□□ -0.32
Clca3bE9PUL3 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clca3bE9PUL3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms