Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gm9796-201ENSMUST00000062249 2250 ntBASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gm9673-201ENSMUST00000119287 781 ntBASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gm25554-201ENSMUST00000158075 113 ntBASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gm20414-201ENSMUST00000172918 646 ntBASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gm4978-201ENSMUST00000071565 801 ntBASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hfm1D3Z4R1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm44414-201ENSMUST00000203660 2109 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm11578-201ENSMUST00000118530 459 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm13019-201ENSMUST00000120000 276 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm22379-201ENSMUST00000157480 131 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm7719-201ENSMUST00000182374 975 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm28833-201ENSMUST00000189671 559 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.84■□□□□ 0.29
Hfm1D3Z4R1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hfm1D3Z4R1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hfm1D3Z4R1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Hfm1D3Z4R1 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.83■□□□□ 0.29
Hfm1D3Z4R1 AC158636.1-201ENSMUST00000220118 1393 ntBASIC16.83■□□□□ 0.29
Hfm1D3Z4R1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Hfm1D3Z4R1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm8451-201ENSMUST00000170338 447 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm17070-201ENSMUST00000170463 784 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm43163-201ENSMUST00000196571 442 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm6855-201ENSMUST00000206307 790 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm40879-201ENSMUST00000220759 612 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 AC130477.1-201ENSMUST00000226982 420 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm7536-201ENSMUST00000077389 444 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm5453-201ENSMUST00000080866 447 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gm18642-201ENSMUST00000206642 1400 ntBASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hfm1D3Z4R1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms