Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shank1D3YZU1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm12628-201ENSMUST00000122193 382 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm26286-201ENSMUST00000104166 134 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm37458-201ENSMUST00000194055 410 ntBASIC10.93□□□□□ -0.66
Shank1D3YZU1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Shank1D3YZU1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Mir874-201ENSMUST00000104769 76 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm22920-201ENSMUST00000102175 109 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm18304-201ENSMUST00000189162 546 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm44329-201ENSMUST00000197469 112 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm2875-201ENSMUST00000211333 360 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Shank1D3YZU1 Gm26448-201ENSMUST00000082446 203 ntBASIC10.92□□□□□ -0.66
Shank1D3YZU1 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Shank1D3YZU1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms