Protein–RNA interactions for Protein: B2RXZ1

Pnldc1, Poly(A)-specific ribonuclease PNLDC1, mousemouse

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pnldc1B2RXZ1 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.29□□□□□ -0.44
Pnldc1B2RXZ1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pnldc1B2RXZ1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pnldc1B2RXZ1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Gm9083-201ENSMUST00000120423 819 ntBASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Gm44124-201ENSMUST00000204159 472 ntBASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pnldc1B2RXZ1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pnldc1B2RXZ1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Gm12997-201ENSMUST00000120207 640 ntBASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Mir5132-201ENSMUST00000175166 71 ntBASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Gm26956-201ENSMUST00000182176 986 ntBASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pnldc1B2RXZ1 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pnldc1B2RXZ1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pnldc1B2RXZ1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pnldc1B2RXZ1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms