Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Gm19994-201ENSMUST00000217086 586 ntBASIC12.47□□□□□ -0.41
Tubb1A2AQ07 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Gm7046-201ENSMUST00000221351 977 ntBASIC12.47□□□□□ -0.41
Tubb1A2AQ07 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Morn2-202ENSMUST00000227729 656 ntBASIC12.47□□□□□ -0.41
Tubb1A2AQ07 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Gm25857-201ENSMUST00000082788 129 ntBASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb1A2AQ07 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm23912-201ENSMUST00000104687 87 ntBASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm8062-201ENSMUST00000139696 444 ntBASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Tubb1A2AQ07 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Tubb1A2AQ07 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tubb1A2AQ07 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms