Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm23912-201ENSMUST00000104687 87 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm24644-201ENSMUST00000157114 139 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm27892-201ENSMUST00000185017 106 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm44405-201ENSMUST00000198952 126 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm6180-201ENSMUST00000065243 498 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm10076-201ENSMUST00000073238 384 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm22058-201ENSMUST00000083393 310 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Trav12d-1A0N8R0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm27486-201ENSMUST00000184923 80 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm5904-201ENSMUST00000210286 865 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm5781-201ENSMUST00000219792 443 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Trav12d-1A0N8R0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Trav12d-1A0N8R0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms