Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.61□□□□□ -0.07
Cfap99A0A140LIX9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Gm45118-201ENSMUST00000208928 825 ntBASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Gm45598-202ENSMUST00000210719 986 ntBASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cfap99A0A140LIX9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm9062-201ENSMUST00000117712 727 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm29615-201ENSMUST00000185371 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28224-201ENSMUST00000186078 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm29001-201ENSMUST00000186177 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28292-201ENSMUST00000186593 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28101-201ENSMUST00000187608 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm29076-201ENSMUST00000187689 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28302-201ENSMUST00000187931 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28646-201ENSMUST00000188220 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28205-201ENSMUST00000189177 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm29032-201ENSMUST00000189797 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm28695-201ENSMUST00000190300 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm37448-201ENSMUST00000192795 697 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Spcs1-203ENSMUST00000226374 592 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cfap99A0A140LIX9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms