Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav6n-6A0A075B6B2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm10156-201ENSMUST00000122364 462 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm38230-201ENSMUST00000193572 1159 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm37922-201ENSMUST00000195596 455 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm10012-201ENSMUST00000078252 192 ntBASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav6n-6A0A075B6B2 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm24644-201ENSMUST00000157114 139 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm17150-201ENSMUST00000165577 381 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm24196-201ENSMUST00000179161 110 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm8652-201ENSMUST00000181363 964 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.11□□□□□ -0.95
Trav6n-6A0A075B6B2 Gm6458-201ENSMUST00000211573 635 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms