Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.68□□□□□ -0.38
Speer3W4VSP1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Speer3W4VSP1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm8213-201ENSMUST00000118191 441 ntBASIC12.67□□□□□ -0.38
Speer3W4VSP1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm3760-201ENSMUST00000167475 804 ntBASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC12.67□□□□□ -0.38
Speer3W4VSP1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm29036-201ENSMUST00000189967 877 ntBASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm18692-201ENSMUST00000193047 511 ntBASIC12.67□□□□□ -0.38
Speer3W4VSP1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Fxr1-202ENSMUST00000167354 1986 ntTSL 5 BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Speer3W4VSP1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm9506-201ENSMUST00000118516 320 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm11814-201ENSMUST00000119515 929 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm11233-201ENSMUST00000122357 634 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm28941-201ENSMUST00000185536 1017 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 AC153529.1-201ENSMUST00000217818 370 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 AC154424.1-201ENSMUST00000225883 799 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 AC154683.1-201ENSMUST00000228409 1284 ntBASIC12.66□□□□□ -0.38
Speer3W4VSP1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Speer3W4VSP1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms