Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
H2afb2S4R1M3 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
H2afb2S4R1M3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm27501-201ENSMUST00000183599 107 ntBASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm9996-201ENSMUST00000070359 913 ntBASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Pck2-205ENSMUST00000226352 2784 ntBASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.2□□□□□ -0.46
H2afb2S4R1M3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.19□□□□□ -0.46
H2afb2S4R1M3 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.19□□□□□ -0.46
H2afb2S4R1M3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
H2afb2S4R1M3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms