Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.89□□□□□ -0.51
Cdh17Q9R100 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.89□□□□□ -0.51
Cdh17Q9R100 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh17Q9R100 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm11424-201ENSMUST00000121929 829 ntBASIC11.88□□□□□ -0.51
Cdh17Q9R100 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.88□□□□□ -0.51
Cdh17Q9R100 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.88□□□□□ -0.51
Cdh17Q9R100 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.88□□□□□ -0.51
Cdh17Q9R100 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.88□□□□□ -0.51
Cdh17Q9R100 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh17Q9R100 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.87□□□□□ -0.51
Cdh17Q9R100 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.87□□□□□ -0.51
Cdh17Q9R100 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Gm27514-201ENSMUST00000183692 110 ntBASIC11.87□□□□□ -0.51
Cdh17Q9R100 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Cdh17Q9R100 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms