Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm13350-201ENSMUST00000120519 479 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm43758-201ENSMUST00000199500 367 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Cts7-204ENSMUST00000225321 1257 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.89□□□□□ -0.67
Nubp2Q9R061 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nubp2Q9R061 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gm2991-201ENSMUST00000173338 480 ntBASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gm6334-201ENSMUST00000207083 228 ntBASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gm9257-201ENSMUST00000221254 232 ntBASIC10.88□□□□□ -0.67
Nubp2Q9R061 Morn2-202ENSMUST00000227729 656 ntBASIC10.88□□□□□ -0.67
Nubp2Q9R061 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nubp2Q9R061 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms