Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.25□□□□□ -0.13
Scn11aQ9R053 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.25□□□□□ -0.13
Scn11aQ9R053 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn11aQ9R053 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm8459-201ENSMUST00000162504 760 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm5451-201ENSMUST00000080545 579 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm11956-201ENSMUST00000119525 512 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Gm20495-201ENSMUST00000173902 235 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Lect2-202ENSMUST00000225183 823 ntBASIC14.24□□□□□ -0.13
Scn11aQ9R053 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn11aQ9R053 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.23□□□□□ -0.13
Scn11aQ9R053 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Gm27390-201ENSMUST00000184516 176 ntBASIC14.23□□□□□ -0.13
Scn11aQ9R053 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.23□□□□□ -0.13
Scn11aQ9R053 Gm40879-201ENSMUST00000220759 612 ntBASIC14.23□□□□□ -0.13
Scn11aQ9R053 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Scn11aQ9R053 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Scn11aQ9R053 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms