Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf4Q9QZS2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm8420-201ENSMUST00000097103 598 ntBASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf4Q9QZS2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Gm12036-201ENSMUST00000120008 530 ntBASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf4Q9QZS2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms