Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 n-R5s71-201ENSMUST00000093668 119 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm10580-201ENSMUST00000097985 396 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm10582-201ENSMUST00000097987 396 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm10583-201ENSMUST00000097988 396 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm14497-201ENSMUST00000119537 580 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm14234-201ENSMUST00000119539 845 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm4462-201ENSMUST00000166453 492 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm15528-201ENSMUST00000117821 864 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Gm42660-201ENSMUST00000197733 947 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col4a4Q9QZR9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col4a4Q9QZR9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms