Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Prg4Q9JM99 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.19□□□□□ -0.62
Prg4Q9JM99 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Prg4Q9JM99 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.19□□□□□ -0.62
Prg4Q9JM99 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm26286-201ENSMUST00000104166 134 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm12439-201ENSMUST00000117162 365 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm14539-201ENSMUST00000117527 174 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm14201-201ENSMUST00000117627 289 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm24990-201ENSMUST00000157406 323 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm8343-201ENSMUST00000182705 994 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm18038-201ENSMUST00000197900 485 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.18□□□□□ -0.62
Prg4Q9JM99 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.18□□□□□ -0.62
Prg4Q9JM99 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.17□□□□□ -0.62
Prg4Q9JM99 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.17□□□□□ -0.62
Prg4Q9JM99 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Gm12266-201ENSMUST00000120311 962 ntBASIC11.17□□□□□ -0.62
Prg4Q9JM99 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Gm12164-201ENSMUST00000121695 551 ntBASIC11.17□□□□□ -0.62
Prg4Q9JM99 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prg4Q9JM99 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms