Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Gm5425-201ENSMUST00000214125 459 ntBASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trem1Q9JKE2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Zfp944-201ENSMUST00000115535 2784 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Gm44369-201ENSMUST00000204543 2175 ntBASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trem1Q9JKE2 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms