Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Ank2-226ENSMUST00000189368 339 ntBASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gm18049-201ENSMUST00000208909 581 ntBASIC9.73□□□□□ -0.85
Smco4Q9JIS3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC9.73□□□□□ -0.85
Smco4Q9JIS3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco4Q9JIS3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm11025-201ENSMUST00000140773 466 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm17968-201ENSMUST00000194902 784 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm44492-201ENSMUST00000197012 141 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm18057-201ENSMUST00000208220 503 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Smco4Q9JIS3 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms