Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.6□□□□□ -0.71
Lime1Q9EQR5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Gm5706-201ENSMUST00000181525 993 ntBASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Gm27023-201ENSMUST00000182372 285 ntBASIC10.6□□□□□ -0.71
Lime1Q9EQR5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.6□□□□□ -0.71
Lime1Q9EQR5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Lime1Q9EQR5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.59□□□□□ -0.71
Lime1Q9EQR5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.59□□□□□ -0.71
Lime1Q9EQR5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Lime1Q9EQR5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Lime1Q9EQR5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Rprl1-201ENSMUST00000158050 327 ntBASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Gm16379-201ENSMUST00000161469 348 ntBASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Lime1Q9EQR5 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms