Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hmgn3Q9DCB1 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
Hmgn3Q9DCB1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Gm42612-201ENSMUST00000197986 623 ntBASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Gm43170-201ENSMUST00000199827 612 ntBASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Hmgn3Q9DCB1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmgn3Q9DCB1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms