Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Gm14247-201ENSMUST00000120950 237 ntBASIC16.04■□□□□ 0.16
U2af1Q9D883 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Gm28450-201ENSMUST00000187349 638 ntBASIC16.04■□□□□ 0.16
U2af1Q9D883 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.04■□□□□ 0.16
U2af1Q9D883 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Gm37131-201ENSMUST00000192502 1561 ntBASIC16.04■□□□□ 0.16
U2af1Q9D883 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
U2af1Q9D883 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
U2af1Q9D883 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
U2af1Q9D883 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
U2af1Q9D883 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Gm12217-201ENSMUST00000118858 696 ntBASIC16.03■□□□□ 0.16
U2af1Q9D883 Gm12380-201ENSMUST00000119012 544 ntBASIC16.03■□□□□ 0.16
U2af1Q9D883 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
U2af1Q9D883 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
U2af1Q9D883 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.03■□□□□ 0.16
U2af1Q9D883 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
U2af1Q9D883 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
U2af1Q9D883 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
U2af1Q9D883 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
U2af1Q9D883 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC16.02■□□□□ 0.16
U2af1Q9D883 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
U2af1Q9D883 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
U2af1Q9D883 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.02■□□□□ 0.16
U2af1Q9D883 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 Gm23949-201ENSMUST00000104027 127 ntBASIC16.02■□□□□ 0.16
U2af1Q9D883 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 Gm15711-201ENSMUST00000118889 535 ntBASIC16.02■□□□□ 0.16
U2af1Q9D883 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
U2af1Q9D883 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.02■□□□□ 0.16
U2af1Q9D883 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC16.02■□□□□ 0.16
U2af1Q9D883 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.02■□□□□ 0.16
U2af1Q9D883 CT571245.2-201ENSMUST00000218421 305 ntBASIC16.02■□□□□ 0.16
U2af1Q9D883 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.02■□□□□ 0.16
U2af1Q9D883 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
U2af1Q9D883 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
U2af1Q9D883 Gm14132-201ENSMUST00000117188 1719 ntBASIC16.02■□□□□ 0.15
U2af1Q9D883 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
U2af1Q9D883 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC16.02■□□□□ 0.15
U2af1Q9D883 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.01■□□□□ 0.15
U2af1Q9D883 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC16.01■□□□□ 0.15
U2af1Q9D883 Gm22133-201ENSMUST00000102082 109 ntBASIC16.01■□□□□ 0.15
U2af1Q9D883 Gm7857-201ENSMUST00000117957 358 ntBASIC16.01■□□□□ 0.15
U2af1Q9D883 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Rps4l-202ENSMUST00000204242 789 ntBASIC16.01■□□□□ 0.15
U2af1Q9D883 Gm4607-201ENSMUST00000206649 577 ntBASIC16.01■□□□□ 0.15
U2af1Q9D883 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.01■□□□□ 0.15
U2af1Q9D883 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
U2af1Q9D883 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
U2af1Q9D883 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms