Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Gm5187-201ENSMUST00000117317 991 ntBASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Gm17931-201ENSMUST00000208132 634 ntBASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc7Q9D541 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm11531-201ENSMUST00000117614 555 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm12164-201ENSMUST00000121695 551 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Mir1982-201ENSMUST00000157368 74 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Mospd4-201ENSMUST00000180618 576 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm5370-201ENSMUST00000187187 574 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm38002-201ENSMUST00000193255 180 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ccdc7Q9D541 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Gm13786-201ENSMUST00000122371 333 ntBASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc7Q9D541 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms