Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hdhd3Q9CYW4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hdhd3Q9CYW4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hdhd3Q9CYW4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Hdhd3Q9CYW4 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
Hdhd3Q9CYW4 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hdhd3Q9CYW4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hdhd3Q9CYW4 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm9022-201ENSMUST00000182482 992 ntBASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm37917-201ENSMUST00000194711 392 ntBASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm18624-201ENSMUST00000220966 658 ntBASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.91□□□□□ -0.82
Hdhd3Q9CYW4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm13369-201ENSMUST00000119442 987 ntBASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Proscos-202ENSMUST00000178990 666 ntBASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm38671-201ENSMUST00000200573 130 ntBASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm44882-201ENSMUST00000205702 802 ntBASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.9□□□□□ -0.82
Hdhd3Q9CYW4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms