Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ssu72Q9CY97 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm13736-201ENSMUST00000119272 253 ntBASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm13342-201ENSMUST00000121055 207 ntBASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.1□□□□□ -0.47
Ssu72Q9CY97 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm42693-201ENSMUST00000196779 631 ntBASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.1□□□□□ -0.47
Ssu72Q9CY97 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Gm22331-201ENSMUST00000158066 136 ntBASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Gm22058-201ENSMUST00000083393 310 ntBASIC12.09□□□□□ -0.47
Ssu72Q9CY97 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ssu72Q9CY97 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ssu72Q9CY97 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Ssu72Q9CY97 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ssu72Q9CY97 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ssu72Q9CY97 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ssu72Q9CY97 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms