Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gm13392-201ENSMUST00000117708 150 ntBASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gm43118-201ENSMUST00000199149 775 ntBASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gm44958-201ENSMUST00000203734 736 ntBASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Khdc3Q9CWU5 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm13570-201ENSMUST00000140763 309 ntBASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm44882-201ENSMUST00000205702 802 ntBASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm10478-201ENSMUST00000084451 396 ntBASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.72□□□□□ -0.53
Khdc3Q9CWU5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Khdc3Q9CWU5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms