Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Gm44405-201ENSMUST00000198952 126 ntBASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rnf135Q9CWS1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm15370-201ENSMUST00000117158 253 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm14381-201ENSMUST00000122105 414 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm13786-201ENSMUST00000122371 333 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm2991-201ENSMUST00000173338 480 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm3890-201ENSMUST00000182416 207 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm37489-201ENSMUST00000191883 159 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm5904-201ENSMUST00000210286 865 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf135Q9CWS1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm12314-201ENSMUST00000118104 538 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm13736-201ENSMUST00000119272 253 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm26461-201ENSMUST00000175064 290 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm39404-201ENSMUST00000216350 313 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Gm45925-201ENSMUST00000218882 744 ntBASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf135Q9CWS1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf135Q9CWS1 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf135Q9CWS1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf135Q9CWS1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf135Q9CWS1 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf135Q9CWS1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms