Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm13350-201ENSMUST00000120519 479 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm14381-201ENSMUST00000122105 414 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm7584-201ENSMUST00000175829 940 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm9022-201ENSMUST00000182482 992 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm10076-201ENSMUST00000073238 384 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl35Q9CQL6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Gm13570-201ENSMUST00000140763 309 ntBASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Gm31256-201ENSMUST00000194705 506 ntBASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Gm21769-201ENSMUST00000211922 111 ntBASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl35Q9CQL6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms