Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm27397-201ENSMUST00000184997 107 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm10576-201ENSMUST00000191927 825 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 AC124732.2-201ENSMUST00000221977 316 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.91□□□□□ -0.82
RTRAFQ9CQE8 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm4995-201ENSMUST00000117247 432 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm13453-201ENSMUST00000118708 357 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm15376-201ENSMUST00000122258 783 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm24513-201ENSMUST00000174964 138 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm5279-201ENSMUST00000199575 745 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
RTRAFQ9CQE8 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms