Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gm13015-201ENSMUST00000118674 204 ntBASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gm12384-201ENSMUST00000119228 919 ntBASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 AC159295.1-201ENSMUST00000225326 940 ntBASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Mir339-201ENSMUST00000083659 96 ntBASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Spata33-207ENSMUST00000212760 4074 ntBASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Chchd1Q9CQA6 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Chchd1Q9CQA6 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms