Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gm13829-201ENSMUST00000119600 138 ntBASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gm27243-201ENSMUST00000183964 521 ntBASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gm29705-201ENSMUST00000212598 474 ntBASIC11.99□□□□□ -0.49
Trim8Q99PJ2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trim8Q99PJ2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Mir1894-201ENSMUST00000122802 81 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm6266-201ENSMUST00000203844 806 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Gm17794-201ENSMUST00000220252 955 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trim8Q99PJ2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trim8Q99PJ2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms