Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Gm9257-201ENSMUST00000221254 232 ntBASIC11.91□□□□□ -0.5
Msh4Q99MT2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.91□□□□□ -0.5
Msh4Q99MT2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.91□□□□□ -0.5
Msh4Q99MT2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.9□□□□□ -0.5
Msh4Q99MT2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.9□□□□□ -0.5
Msh4Q99MT2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Gm13736-201ENSMUST00000119272 253 ntBASIC11.9□□□□□ -0.5
Msh4Q99MT2 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.9□□□□□ -0.5
Msh4Q99MT2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Gm8018-201ENSMUST00000173536 789 ntBASIC11.9□□□□□ -0.5
Msh4Q99MT2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.9□□□□□ -0.5
Msh4Q99MT2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Msh4Q99MT2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Msh4Q99MT2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.9□□□□□ -0.51
Msh4Q99MT2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh4Q99MT2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh4Q99MT2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Msh4Q99MT2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh4Q99MT2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh4Q99MT2 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.9□□□□□ -0.51
Msh4Q99MT2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
Msh4Q99MT2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Msh4Q99MT2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gm22323-201ENSMUST00000103832 109 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gm25214-201ENSMUST00000104573 129 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 Gm12058-201ENSMUST00000118614 437 ntBASIC11.89□□□□□ -0.51
Msh4Q99MT2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms