Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.82□□□□□ -0.52
Cstf3Q99LI7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gm27514-201ENSMUST00000183692 110 ntBASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gm43433-201ENSMUST00000196573 481 ntBASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.82□□□□□ -0.52
Cstf3Q99LI7 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Mir1247-201ENSMUST00000116706 82 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm12058-201ENSMUST00000118614 437 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm37201-201ENSMUST00000191845 523 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm35960-201ENSMUST00000202712 767 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.81□□□□□ -0.52
Cstf3Q99LI7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.81□□□□□ -0.52
Cstf3Q99LI7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms