Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vmp1Q99KU0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vmp1Q99KU0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.83□□□□□ -0.51
Vmp1Q99KU0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Vmp1Q99KU0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm13492-201ENSMUST00000119772 665 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm35960-201ENSMUST00000202712 767 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm6007-201ENSMUST00000208170 823 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Mir339-201ENSMUST00000083659 96 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Vmp1Q99KU0 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gm9630-201ENSMUST00000178304 885 ntBASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gm29396-201ENSMUST00000185659 716 ntBASIC11.82□□□□□ -0.52
Vmp1Q99KU0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gm5904-201ENSMUST00000210286 865 ntBASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Vmp1Q99KU0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms