Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdha3Q91Y16 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Gm22323-201ENSMUST00000103832 109 ntBASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Gm26083-201ENSMUST00000157904 193 ntBASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Gm44882-201ENSMUST00000205702 802 ntBASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Gm39404-201ENSMUST00000216350 313 ntBASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdha3Q91Y16 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm23270-201ENSMUST00000104055 131 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm27046-201ENSMUST00000182160 463 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm28882-201ENSMUST00000185504 314 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm9257-201ENSMUST00000221254 232 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdha3Q91Y16 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Pcdha3Q91Y16 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms