Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm43178-201ENSMUST00000197257 1386 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm37309-201ENSMUST00000194994 1639 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Prl3a1-201ENSMUST00000049463 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm18416-201ENSMUST00000175635 1003 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm42509-201ENSMUST00000197390 781 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gm45880-201ENSMUST00000213041 853 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr641-201ENSMUST00000098183 939 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Nrxn1-225ENSMUST00000197268 2280 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Vsnl1-202ENSMUST00000220506 1699 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb20Q91XZ9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb20Q91XZ9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms