Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm22005-201ENSMUST00000082795 141 ntBASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 BC043934-202ENSMUST00000185694 2356 ntBASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdhb3Q91XZ7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12507-201ENSMUST00000119155 415 ntBASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm38384-201ENSMUST00000195413 1122 ntBASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm19931-201ENSMUST00000198920 368 ntBASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm6983-201ENSMUST00000214912 628 ntBASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhb3Q91XZ7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms