Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm8885-201ENSMUST00000189382 598 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Cts7-204ENSMUST00000225321 1257 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Gm10312-201ENSMUST00000078515 489 ntBASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb6Q91XZ4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm11930-201ENSMUST00000117788 190 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm5706-201ENSMUST00000181525 993 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm3096-201ENSMUST00000185770 364 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm31256-201ENSMUST00000194705 506 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb6Q91XZ4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb6Q91XZ4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb6Q91XZ4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms