Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim60Q8VI40 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm11591-201ENSMUST00000120063 702 ntBASIC12.62□□□□□ -0.39
Trim60Q8VI40 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm42693-201ENSMUST00000196779 631 ntBASIC12.62□□□□□ -0.39
Trim60Q8VI40 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.62□□□□□ -0.39
Trim60Q8VI40 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Paupar-201ENSMUST00000194826 3482 ntBASIC12.62□□□□□ -0.39
Trim60Q8VI40 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.62□□□□□ -0.39
Trim60Q8VI40 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.62□□□□□ -0.39
Trim60Q8VI40 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim60Q8VI40 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gm25927-201ENSMUST00000175058 117 ntBASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.61□□□□□ -0.39
Trim60Q8VI40 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim60Q8VI40 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms