Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.91□□□□□ -0.5
Q8VDP2 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Q8VDP2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.91□□□□□ -0.5
Q8VDP2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.91□□□□□ -0.5
Q8VDP2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.91□□□□□ -0.5
Q8VDP2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Gm17837-201ENSMUST00000186435 985 ntBASIC11.91□□□□□ -0.5
Q8VDP2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.91□□□□□ -0.5
Q8VDP2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.91□□□□□ -0.5
Q8VDP2 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
Q8VDP2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.91□□□□□ -0.5
Q8VDP2 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Q8VDP2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Q8VDP2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Q8VDP2 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Q8VDP2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Q8VDP2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Q8VDP2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Q8VDP2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.9□□□□□ -0.5
Q8VDP2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Gm19931-201ENSMUST00000198920 368 ntBASIC11.9□□□□□ -0.5
Q8VDP2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Q8VDP2 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Q8VDP2 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Q8VDP2 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Q8VDP2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Q8VDP2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Q8VDP2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.89□□□□□ -0.51
Q8VDP2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.89□□□□□ -0.51
Q8VDP2 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Q8VDP2 CT009601.1-201ENSMUST00000225567 2705 ntBASIC11.89□□□□□ -0.51
Q8VDP2 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.89□□□□□ -0.51
Q8VDP2 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Q8VDP2 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Q8VDP2 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Q8VDP2 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Q8VDP2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Gm13453-201ENSMUST00000118708 357 ntBASIC11.89□□□□□ -0.51
Q8VDP2 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.89□□□□□ -0.51
Q8VDP2 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Q8VDP2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.89□□□□□ -0.51
Q8VDP2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Mir8102-201ENSMUST00000184148 139 ntBASIC11.89□□□□□ -0.51
Q8VDP2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.89□□□□□ -0.51
Q8VDP2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.89□□□□□ -0.51
Q8VDP2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Q8VDP2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q8VDP2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms