Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Mir1897-201ENSMUST00000122581 272 ntBASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Gm27618-201ENSMUST00000183671 60 ntBASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Gm33320-201ENSMUST00000192232 530 ntBASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc9Q8VC31 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gm45161-201ENSMUST00000207316 2263 ntBASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gm15770-201ENSMUST00000117498 584 ntBASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gm13453-201ENSMUST00000118708 357 ntBASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Gm15920-201ENSMUST00000118998 402 ntBASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ccdc9Q8VC31 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Gm44344-201ENSMUST00000200287 129 ntBASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Gm44872-201ENSMUST00000207864 420 ntBASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Gm43636-201ENSMUST00000201501 2235 ntBASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ccdc9Q8VC31 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms