Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Gm11918-201ENSMUST00000121660 179 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Slf1Q8R3P9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Slf1Q8R3P9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Slf1Q8R3P9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Slf1Q8R3P9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Gm14760-201ENSMUST00000121831 999 ntBASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Gm38671-201ENSMUST00000200573 130 ntBASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Slf1Q8R3P9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Mir686-201ENSMUST00000102174 109 ntBASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Gm13612-201ENSMUST00000119276 390 ntBASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Slf1Q8R3P9 Cog3-203ENSMUST00000227473 4197 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms