Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm23912-201ENSMUST00000104687 87 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm14213-201ENSMUST00000119778 768 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm7150-201ENSMUST00000122032 981 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm9507-202ENSMUST00000180157 654 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm44711-201ENSMUST00000205414 1264 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 BC106175-202ENSMUST00000219344 1213 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gm18968-201ENSMUST00000221319 862 ntBASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ddx54Q8K4L0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Ddx54Q8K4L0 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm23272-201ENSMUST00000104053 129 ntBASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm5419-201ENSMUST00000119301 527 ntBASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm45527-201ENSMUST00000211052 774 ntBASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx54Q8K4L0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Gm11560-201ENSMUST00000117567 948 ntBASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Gm14270-201ENSMUST00000118388 846 ntBASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Gm20414-201ENSMUST00000172918 646 ntBASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Gm19587-201ENSMUST00000191395 545 ntBASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx54Q8K4L0 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx54Q8K4L0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms