Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Clrn1Q8K445 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm24830-201ENSMUST00000102024 166 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm14832-201ENSMUST00000121289 322 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm24845-201ENSMUST00000158034 109 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm31256-201ENSMUST00000194705 506 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm44364-201ENSMUST00000198368 141 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm26232-201ENSMUST00000083360 166 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.52□□□□□ -0.57
Clrn1Q8K445 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.51□□□□□ -0.57
Clrn1Q8K445 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Gm15547-201ENSMUST00000122152 333 ntBASIC11.51□□□□□ -0.57
Clrn1Q8K445 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Gm45865-201ENSMUST00000211815 945 ntBASIC11.51□□□□□ -0.57
Clrn1Q8K445 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.51□□□□□ -0.57
Clrn1Q8K445 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Clrn1Q8K445 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Clrn1Q8K445 Gm23270-201ENSMUST00000104055 131 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 140 ms