Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.88□□□□□ -0.67
ShfQ8CG80 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.88□□□□□ -0.67
ShfQ8CG80 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.88□□□□□ -0.67
ShfQ8CG80 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.88□□□□□ -0.67
ShfQ8CG80 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
ShfQ8CG80 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
ShfQ8CG80 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.87□□□□□ -0.67
ShfQ8CG80 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm4984-201ENSMUST00000115987 360 ntBASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm13570-201ENSMUST00000140763 309 ntBASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm40466-201ENSMUST00000212174 422 ntBASIC10.87□□□□□ -0.67
ShfQ8CG80 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
ShfQ8CG80 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ShfQ8CG80 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ShfQ8CG80 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ShfQ8CG80 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
ShfQ8CG80 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ShfQ8CG80 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.86□□□□□ -0.67
ShfQ8CG80 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms