Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm8213-201ENSMUST00000118191 441 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm11439-201ENSMUST00000118598 409 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm13612-201ENSMUST00000119276 390 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm2231-201ENSMUST00000125661 612 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Rmrp-201ENSMUST00000157463 271 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Mir7023-201ENSMUST00000185093 64 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm8598-201ENSMUST00000221184 836 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm5867-201ENSMUST00000063197 592 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc28bQ8CEG5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gm10156-201ENSMUST00000122364 462 ntBASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Proscos-202ENSMUST00000178990 666 ntBASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gm27331-201ENSMUST00000183705 60 ntBASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gm44855-201ENSMUST00000205725 362 ntBASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc28bQ8CEG5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms