Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm11531-201ENSMUST00000117614 555 ntBASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Gm38092-201ENSMUST00000195600 653 ntBASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Gm45186-201ENSMUST00000206874 478 ntBASIC14.41□□□□□ -0.1
Nup88Q8CEC0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup88Q8CEC0 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Rubie-203ENSMUST00000227803 2430 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm25214-201ENSMUST00000104573 129 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm13492-201ENSMUST00000119772 665 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm15703-201ENSMUST00000120250 880 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm2546-201ENSMUST00000182630 991 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm38317-201ENSMUST00000195564 343 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.4□□□□□ -0.1
Nup88Q8CEC0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms